Alex Gavryushkin

Associate ProfessorAlex Gavryushkin

Jack Erskine 711
Internal Phone: 90212

Qualifications

Research Interests

I work with my colleagues at the Biological Data Science lab and our collaborators to develop mathematics and computer science necessary to answer rigorous questions about molecular data. Our ultimate goal is achieved when we observe how molecular biology and data science shape modern mathematics and computer science.

Recent Publications

  • Chen K., Moravec JÍC., Gavryushkin A., Welch D. and Drummond AJ. (2022) Accounting for errors in data improves divergence time estimates in single-cell cancer evolution.. Mol Biol Evol http://dx.doi.org/10.1093/molbev/msac143.
  • Gardner PP., Paterson JM., McGimpsey S., Ashari-Ghomi F., Umu SU., Pawlik A., Gavryushkin A. and Black MA. (2022) Sustained software development, not number of citations or journal choice, is indicative of accurate bioinformatic software. Genome Biology 23(1) http://dx.doi.org/10.1186/s13059-022-02625-x.
  • Powell RM., Pattison S., Moravec JC., Bhat B., Guirguis N., Markie D., Jones GT., Copedo J., Print CG. and Morison IM. (2022) Tuberous sclerosis complex: a complex case. Cold Spring Harbor molecular case studies 8(3) http://dx.doi.org/10.1101/mcs.a006182.
  • Collienne L. and Gavryushkin A. (2021) Computing nearest neighbour interchange distances between ranked phylogenetic trees. Journal of Mathematical Biology 82(1-2) http://dx.doi.org/10.1007/s00285-021-01567-5.
  • Collienne L., Elmes K., Fischer M., Bryant D. and Gavryushkin A. (2021) Discrete coalescent trees. Journal of Mathematical Biology 83(5) http://dx.doi.org/10.1007/s00285-021-01685-0.