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Sky Basire

Studying towards Master of Science

04 June 2025
HOW TO APPLY
Supervisors: 

Charles Semple

Mike Steel 

 

Working Thesis:

Enumerating Displayed Trees in Tree-Child Phylogenetic Networks.

Phylogenetic networks are digraphs that are used to represent the evolutionary histories of a collection of modern species. Phylogenetic networks generalize phylogenetic trees, and can be viewed as a union of overlapping phylogenetic trees. Thus each phylogenetic network has some number of phylogenetic trees embedded within it. Tree-child networks are a well studied class of phylogenetic networks. In this thesis we will examine formulae for the number of phylogenetic trees displayed by different subclasses of tree child phylogenetic networks, and establish a formula for the number of embedded phylogenetic trees of any tree child phylogenetic network.

 

Research Interests:

Combinatorics, Graph Theory, and Phylogenetics.

 

Academic History:

BSc in Mathematics and Computer Science in 2022, Univeristy of Canterbury 

BSc (Hons), first class, in Mathematics in 2023, Univeristy of Canterbury 

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